Index

Symbols

--add-submission matflow-demo-workflow-make command line option matflow-make command line option --add-to-known matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-submit command line option --all matflow-config-get command line option matflow-data-cache command line option matflow-data-purge command line option matflow-data-recache command line option matflow-program-cache command line option matflow-program-purge command line option matflow-program-recache command line option --array-idx matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-js-JS_IDX-stderr command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-js-JS_IDX-stdout command line option --backup matflow-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk-parameter-base command line option matflow-workflow-WORKFLOW_REF-rechunk-runs command line option --cancel matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-submit command line option --chunk-size matflow-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk-parameter-base command line option matflow-workflow-WORKFLOW_REF-rechunk-runs command line option --click-exit-code matflow-internal-noop command line option --config-dir matflow command line option matflow-manage-get-config-path command line option matflow-manage-reset-config command line option --config-key matflow command line option --defaults matflow-config-add-scheduler command line option matflow-config-add-shell command line option matflow-config-add-shell-wsl command line option --doc matflow-demo-workflow-copy command line option matflow-demo-workflow-show command line option --docker-archive matflow-env-setup-damask command line option matflow-env-setup-moose command line option --docker-exe matflow-env-setup-damask command line option matflow-env-setup-moose command line option --docker-image matflow-env-setup-damask command line option matflow-env-setup-moose command line option --element matflow-workflow-WORKFLOW_REF-abort-run command line option --env-source-file matflow-env-add command line option matflow-env-setup command line option matflow-env-setup-python command line option --exclude-os matflow-submission-shell-info command line option --exist-not-ok matflow-data-cache command line option matflow-manage-cache-all command line option matflow-program-cache command line option --exist-ok matflow-data-cache command line option matflow-data-purge command line option matflow-data-recache command line option matflow-manage-cache-all command line option matflow-manage-purge-all command line option matflow-manage-recache-all command line option matflow-program-cache command line option matflow-program-purge command line option matflow-program-recache command line option --file matflow-config-get command line option matflow-helper-pid command line option matflow-test command line option matflow-test-hpcflow command line option --file-name matflow-env-add command line option matflow-env-setup-python command line option --force-array matflow-workflow-WORKFLOW_REF-add-submission command line option --format matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --full matflow-show command line option --help matflow command line option --hostname matflow-manage-clear-cache command line option --hpcflow-version matflow command line option --include-execute matflow-workflow-WORKFLOW_REF-zip command line option matflow-zip command line option --include-rechunk-backups matflow-workflow-WORKFLOW_REF-zip command line option matflow-zip command line option --infile1 matflow-demo-software-doSomething command line option --infile2 matflow-demo-software-doSomething command line option --jobscripts matflow-workflow-WORKFLOW_REF-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-wait command line option --js-parallelism matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-add-submission command line option matflow-workflow-WORKFLOW_REF-submit command line option --json matflow-config-append command line option matflow-config-prepend command line option matflow-config-set command line option matflow-config-update command line option matflow-submission-get-known command line option --label matflow-env-info command line option matflow-env-remove command line option matflow-env-show command line option --legend matflow-show command line option --list matflow-data command line option matflow-demo-workflow command line option matflow-program command line option --log matflow-unzip command line option matflow-workflow-WORKFLOW_REF-unzip command line option matflow-workflow-WORKFLOW_REF-zip command line option matflow-zip command line option --max-js matflow-workflow-WORKFLOW_REF-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-list-task-jobscripts command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-task-jobscripts command line option --max-recent matflow-show command line option --metadata matflow-config-get command line option --mtex-path matflow-env-setup-matlab command line option --name matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-env-info command line option matflow-env-remove command line option matflow-env-setup-python command line option matflow-env-show command line option matflow-go command line option matflow-make command line option matflow-open-env-source command line option --name-dir matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --name-no-dir matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --name-no-timestamp matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --name-timestamp matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --new matflow-config-import command line option --no-add-to-known matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-submit command line option --no-backup matflow-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk-parameter-base command line option matflow-workflow-WORKFLOW_REF-rechunk-runs command line option --no-callback matflow-config command line option --no-doc matflow-demo-workflow-copy command line option matflow-demo-workflow-show command line option --no-rename matflow-config-import command line option --no-replace matflow-env-add command line option matflow-env-setup-python command line option matflow-env-setup-python-all command line option --no-status matflow-cancel command line option matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option matflow-rechunk command line option matflow-workflow-WORKFLOW_REF-add-submission command line option matflow-workflow-WORKFLOW_REF-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk-parameter-base command line option matflow-workflow-WORKFLOW_REF-rechunk-runs command line option matflow-workflow-WORKFLOW_REF-submit command line option --no-syntax matflow-demo-workflow-show command line option --no-update matflow-show command line option --no-use-current matflow-env-setup-dream3d command line option matflow-env-setup-python command line option matflow-env-setup-python-all command line option

--not-exist-ok matflow-data-purge command line option matflow-data-recache command line option matflow-manage-purge-all command line option matflow-manage-recache-all command line option matflow-program-purge command line option matflow-program-recache command line option --os-info matflow-submission command line option --out matflow-demo-software-doSomething command line option --overwrite matflow-data-install-cache command line option matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option matflow-program-install-cache command line option matflow-workflow-WORKFLOW_REF-zip command line option matflow-zip command line option --path matflow-config-init command line option matflow-config-open command line option matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-env-setup-matlab command line option matflow-go command line option matflow-make command line option matflow-open-config command line option matflow-open-data-cache-dir command line option matflow-open-env-source command line option matflow-open-known-subs command line option matflow-open-log command line option matflow-open-program-cache-dir command line option matflow-open-user-cache-dir command line option matflow-open-user-cache-hostname-dir command line option matflow-open-user-data-dir command line option matflow-open-user-data-hostname-dir command line option matflow-open-user-runtime-dir command line option matflow-open-workflow command line option matflow-unzip command line option matflow-workflow-WORKFLOW_REF-unzip command line option matflow-workflow-WORKFLOW_REF-zip command line option matflow-zip command line option --pipeline-runner-path matflow-env-setup-dream3d command line option --print-idx matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-submit command line option --quiet matflow-cancel command line option matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-submit command line option matflow-workflow-WORKFLOW_REF-wait command line option --raise matflow-internal-noop command line option --ref-type matflow-cancel command line option matflow-open-workflow command line option matflow-rechunk command line option matflow-workflow command line option matflow-zip command line option --rename matflow-config-import command line option --replace matflow-env-add command line option matflow-env-setup-python command line option matflow-env-setup-python-all command line option --run-time-info matflow command line option --runtime-path matflow-env-setup-matlab command line option --setup matflow-env-add command line option --singularity-archive matflow-env-setup-damask command line option matflow-env-setup-moose command line option --singularity-exe matflow-env-setup-damask command line option matflow-env-setup-moose command line option --singularity-sif matflow-env-setup-damask command line option matflow-env-setup-moose command line option --sleep matflow-internal-noop command line option --specifier matflow-env-info command line option matflow-env-remove command line option matflow-env-show command line option --status matflow-cancel command line option matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option matflow-rechunk command line option matflow-workflow-WORKFLOW_REF-add-submission command line option matflow-workflow-WORKFLOW_REF-rechunk command line option matflow-workflow-WORKFLOW_REF-rechunk-parameter-base command line option matflow-workflow-WORKFLOW_REF-rechunk-runs command line option matflow-workflow-WORKFLOW_REF-submit command line option --std-stream matflow command line option --stderr matflow-internal-workflow-PATH-save-parameter command line option --store matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --string matflow-go command line option matflow-make command line option --sub-idx matflow-workflow-WORKFLOW_REF-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-list-task-jobscripts command line option --submission matflow-workflow-WORKFLOW_REF-abort-run command line option --syntax matflow-demo-workflow-show command line option --task matflow-workflow-WORKFLOW_REF-abort-run command line option --task-names matflow-workflow-WORKFLOW_REF-list-task-jobscripts command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-task-jobscripts command line option --tasks matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-add-submission command line option matflow-workflow-WORKFLOW_REF-submit command line option --timeit matflow command line option --timeit-file matflow command line option --timeout matflow-helper-restart command line option matflow-helper-run command line option matflow-helper-start command line option --timeout-check-interval matflow-helper-restart command line option matflow-helper-run command line option matflow-helper-start command line option --ts-fmt matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --ts-name-fmt matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --use-current matflow-env-add command line option matflow-env-setup-dream3d command line option matflow-env-setup-python command line option matflow-env-setup-python-all command line option --value matflow-demo-software-doSomething command line option --var matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option --version matflow command line option --wait matflow-demo-workflow-go command line option matflow-go command line option matflow-workflow-WORKFLOW_REF-submit command line option --watch-interval matflow-helper-restart command line option matflow-helper-run command line option matflow-helper-start command line option --width matflow-workflow-WORKFLOW_REF-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-list-task-jobscripts command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-jobscripts command line option matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-task-jobscripts command line option --with-config matflow command line option -f matflow-helper-pid command line option matflow-show command line option -i1 matflow-demo-software-doSomething command line option -i2 matflow-demo-software-doSomething command line option -j matflow-workflow-WORKFLOW_REF-wait command line option -l matflow-data command line option matflow-demo-workflow command line option matflow-env-info command line option matflow-env-remove command line option matflow-env-show command line option matflow-program command line option -n matflow-env-info command line option matflow-env-remove command line option matflow-env-setup-python command line option matflow-env-show command line option -o matflow-demo-software-doSomething command line option -p matflow-env-setup-dream3d command line option -r matflow-cancel command line option matflow-open-workflow command line option matflow-rechunk command line option matflow-show command line option matflow-workflow command line option matflow-zip command line option -s matflow-env-info command line option matflow-env-remove command line option matflow-env-show command line option -v matflow-demo-software-doSomething command line option matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-go command line option matflow-make command line option

A

A (matflow.param_classes.orientations.LatticeDirection attribute) A_STAR (matflow.param_classes.orientations.LatticeDirection attribute) abort_run() (matflow.Workflow method) abortable (matflow.Action attribute) (matflow.InputFileGenerator attribute) (matflow.OutputFileParser attribute) Action (class in matflow) action (matflow.ActionRule attribute) (matflow.Command attribute) (matflow.ElementAction property) (matflow.ElementActionRun property) action_idx (matflow.ElementAction property) action_runs (matflow.Element property) (matflow.ElementIteration property) ActionEnvironment (class in matflow) ActionRule (class in matflow) actions (matflow.Element property) (matflow.ElementIteration property) (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) ActionScope (class in matflow) ActionScopeType (class in matflow) add_elements() (matflow.WorkflowTask method) add_group() (matflow.Task method) add_iteration() (matflow.WorkflowLoop method) add_loop() (matflow.Workflow method) add_object() (matflow.CommandFilesList method) (matflow.EnvironmentsList method) (matflow.ExecutablesList method) (matflow.GroupList method) (matflow.ParametersList method) (matflow.ResourceList method) (matflow.TaskList method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.WorkflowLoopList method) (matflow.WorkflowTaskList method) add_objects() (matflow.CommandFilesList method) (matflow.EnvironmentsList method) (matflow.ExecutablesList method) (matflow.GroupList method) (matflow.ParametersList method) (matflow.TaskList method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.WorkflowLoopList method) (matflow.WorkflowTaskList method)

add_submission() (matflow.Workflow method) add_task() (matflow.Workflow method) add_task_after() (matflow.Workflow method) add_task_before() (matflow.Workflow method) add_to_env_setup_CLI() (in module matflow.cli) add_variables() (matflow.param_classes.moose.MooseInputDeck method) additive_factor (matflow.ValuePerturbation attribute) address (matflow.SubParameter attribute) all_EAR_IDs (matflow.Jobscript property) (matflow.Submission property) all_EARs (matflow.Jobscript property) (matflow.JobscriptBlock property) (matflow.Submission property) all_EARs_by_jobscript (matflow.Submission property) all_EARs_IDs_by_jobscript (matflow.Submission property) all_labelled_types (matflow.SchemaInput property) all_schema_actions() (matflow.Task method) all_schema_input_normalised_paths (matflow.Task property) all_schema_input_types (matflow.Task property) all_schema_inputs (matflow.Task property) all_schema_output_types (matflow.Task property) all_schema_outputs (matflow.Task property) all_sourced_normalised_paths (matflow.Task property) allow_failed_dependencies (matflow.ElementResources attribute) allow_non_coincident_task_sources (matflow.ElementSet attribute) ALLOWED_PARAMETERS (matflow.ResourceSpec attribute) ANY (matflow.ActionScopeType attribute) (matflow.TaskSourceType attribute) any() (matflow.ActionScope class method) app (in module matflow) (matflow.ElementParameter attribute) app_log_path (matflow.Submission property) APP_STD_DIR_NAME (matflow.Submission attribute) app_std_path (matflow.Submission property) args (matflow.FileNameSpec attribute) arguments (matflow.Command attribute) artifacts_path (matflow.Workflow property) as_base() (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters method) at_submit_metadata (matflow.Jobscript property) (matflow.Submission property) ATTRIBUTE matflow-env-info command line option

B

B (matflow.param_classes.orientations.LatticeDirection attribute) B_STAR (matflow.param_classes.orientations.LatticeDirection attribute) base (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters property) batch_update() (matflow.Workflow method) biaxial() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) BLOCK_ACTION_IDX matflow-internal-workflow-PATH-execute-run command line option

BLOCK_IDX matflow-internal-workflow-PATH-execute-run command line option blocks (matflow.Jobscript property) box_size (matflow.param_classes.seeds.MicrostructureSeeds attribute) build_model() (matflow.param_classes.surrogate.Surrogate method) BUILTIN_ENV_SOURCE (matflow.Environment attribute) BUNGE (matflow.param_classes.orientations.EulerDefinition attribute)

C

C (matflow.param_classes.orientations.LatticeDirection attribute) C_STAR (matflow.param_classes.orientations.LatticeDirection attribute) cached_merged_parameters() (matflow.Workflow method) cancel() (in module matflow) (matflow.Submission method) (matflow.Workflow method) cancel_jobs() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) cast (matflow.Rule attribute) check_exists (matflow.Rule attribute) check_exists() (matflow.ActionRule class method) check_missing (matflow.Rule attribute) check_missing() (matflow.ActionRule class method) check_parameters_exist() (matflow.Workflow method) clean_up (matflow.Action attribute) (matflow.OutputFileParser attribute) clear() (matflow.param_classes.single_crystal_parameters.Perturbation method) cli_runner() (in module matflow.tests.conftest) CMD_IDX matflow-internal-workflow-PATH-save-parameter command line option combine_jobscript_std (matflow.ElementResources attribute) (matflow.ResourceSpec property) combine_scripts (matflow.ElementResources attribute) (matflow.ResourceSpec property) combined_script_indices_file_name (matflow.Jobscript property)

combined_script_indices_file_path (matflow.Jobscript property) Command (class in matflow) command (matflow.ActionRule attribute) (matflow.Command attribute) (matflow.ExecutableInstance attribute) CommandFilesList (class in matflow) commands (matflow.Action attribute) COMMANDS_DIR_NAME (matflow.Submission attribute) commands_file_ID (matflow.ElementActionRun property) commands_idx (matflow.ElementActionRun property) commands_path (matflow.Submission property) CompactProblemFormatter (class in matflow) compose_combined_script() (matflow.Jobscript method) compose_commands() (matflow.ElementActionRun method) compose_jobscript() (matflow.Jobscript method) compose_source() (matflow.Action method) condition (matflow.Rule attribute) config (matflow.WorkflowTemplate attribute) contents (matflow.InputFile property) (matflow.InputFileGeneratorSource property) (matflow.OutputFileParserSource property) copy() (matflow.Environment method) (matflow.param_classes.single_crystal_parameters.Perturbation method) (matflow.Workflow method) copy_non_persistent() (matflow.ResourceSpec method) CPU_arch (matflow.ElementResources attribute) create_damask_loading_plan() (matflow.param_classes.load.LoadCase method) creation_info (matflow.Workflow property)

D

data (matflow.param_classes.orientations.Orientations attribute) data_files_use_opt (matflow.Action attribute) data_idx (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ElementParameter property) data_idx_is_set (matflow.ElementParameter property) DEF_GRAD_RATE (matflow.param_classes.load.StrainRateMode attribute) DEFAULT (matflow.InputSourceType attribute) default (matflow.Parameters attribute) (matflow.Rule attribute) default() (matflow.InputSource class method) DEFAULT_ARRAY_ITEM_VAR (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_ARRAY_SWITCH (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_CONFIGURED_ENVS_FILE (matflow.Environment attribute) DEFAULT_CWD_SWITCH (matflow.SGEPosix attribute) DEFAULT_DEL_CMD (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_JS_CMD (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_LOGIN_NODE_MATCH (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_LOGIN_NODES_CMD (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_SHOW_CMD (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) DEFAULT_SUBMIT_CMD (matflow.QueuedScheduler attribute) (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) default_value (matflow.SchemaInput property) defined_input_types (matflow.ElementSet property) (matflow.Task property) delete() (matflow.Workflow method) dependencies (matflow.Jobscript property) (matflow.JobscriptBlock property) DESTINATION matflow-data-copy command line option matflow-demo-workflow-copy command line option matflow-program-copy command line option

dir_diff (matflow.ElementActionRun property) dir_name (matflow.Element property) (matflow.Task property) (matflow.WorkflowTask property) direct_std_out_err_path (matflow.Jobscript property) direct_stderr_path (matflow.Jobscript property) direct_stdout_path (matflow.Jobscript property) direct_win_pid_file_name (matflow.Jobscript property) direct_win_pid_file_path (matflow.Jobscript property) direction (matflow.param_classes.load.LoadStep attribute) DirectPosix (class in matflow) DirectWindows (class in matflow) disable() (matflow.CompactProblemFormatter method) doc (matflow.Environment attribute) (matflow.FileSpec attribute) (matflow.MetaTaskSchema attribute) (matflow.Rule attribute) (matflow.TaskSchema attribute) (matflow.WorkflowTemplate attribute) documentation (matflow.Environment property) (matflow.FileSpec property) downstream_tasks (matflow.WorkflowLoop property) (matflow.WorkflowTask property) dump_element_group_to_HDF5_group() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) (matflow.param_classes.moose.MooseInputDeck class method) (matflow.param_classes.orientations.OrientationRepresentation class method) (matflow.param_classes.orientations.Orientations class method) (matflow.param_classes.orientations.UnitCellAlignment class method) (matflow.param_classes.seeds.MicrostructureSeeds class method) (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters class method) (matflow.param_classes.surrogate.Surrogate class method) (matflow.ParameterValue class method) dump_frequency (matflow.param_classes.load.LoadStep attribute) dump_to_HDF5_group() (matflow.param_classes.load.LoadCase method) (matflow.param_classes.load.LoadStep method) (matflow.param_classes.moose.MooseInputDeck method) (matflow.param_classes.orientations.OrientationRepresentation method) (matflow.param_classes.orientations.Orientations method) (matflow.param_classes.orientations.UnitCellAlignment method) (matflow.param_classes.seeds.MicrostructureSeeds method) (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters method) (matflow.param_classes.surrogate.Surrogate method) (matflow.ParameterValue method)

E

EAR_ID matflow-internal-workflow-PATH-save-parameter command line option EAR_ID (matflow.JobscriptBlock property) EAR_ID_file_name (matflow.Jobscript property) EAR_ID_file_path (matflow.Jobscript property) EAR_IDs (matflow.ElementIteration property) EAR_IDs_flat (matflow.ElementIteration property) EARs_by_elements (matflow.Submission property) EARs_initialised (matflow.ElementIteration property) elem_iter_IDs (matflow.ElementSet property) Element (class in matflow) element (matflow.ElementAction property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ElementParameter attribute) element_action (matflow.ElementActionRun property) element_IDs (matflow.WorkflowTask property) element_iteration (matflow.ElementAction property) (matflow.ElementActionRun property) element_iterations (matflow.ElementSet property) element_iters (matflow.InputSource attribute) element_local_idx_range (matflow.ElementSet property) element_set (matflow.Element property) (matflow.ElementPropagation property) (matflow.ResourceList property) (matflow.ResourceSpec property) element_set_idx (matflow.Element property) element_sets (matflow.Task property) ElementAction (class in matflow) ElementActionRun (class in matflow) ElementFilter (class in matflow) ElementGroup (class in matflow) ElementInputFiles (class in matflow) ElementInputs (class in matflow) ElementIteration (class in matflow) ElementOutputFiles (class in matflow) ElementOutputs (class in matflow) ElementParameter (class in matflow) ElementPropagation (class in matflow) ElementRepeats (class in matflow) ElementResources (class in matflow) Elements (class in matflow) elements (matflow.ElementSet property) (matflow.WorkflowTask property) elements() (matflow.Workflow method) ElementSet (class in matflow) enable() (matflow.CompactProblemFormatter method) end_time (matflow.ElementActionRun property) (matflow.Jobscript property) (matflow.Submission property) ensure_commands_file() (matflow.Workflow method) ensure_element_sets() (matflow.ElementSet class method)

ensure_input_sources() (matflow.WorkflowTask method) env_configure_damask() (in module matflow.environments) env_configure_dream3d() (in module matflow.environments) env_configure_matlab() (in module matflow.environments) env_configure_moose() (in module matflow.environments) env_configure_python_all() (in module matflow.environments) env_preset (matflow.ElementSet attribute) env_presets (matflow.WorkflowTemplate attribute) env_spec (matflow.ElementActionRun property) env_spec_from_hashable() (matflow.Action static method) env_spec_hashable (matflow.ElementActionRun property) env_spec_to_hashable() (matflow.Action static method) Environment (class in matflow) environment (matflow.ActionEnvironment attribute) (matflow.Executable property) (matflow.ExecutablesList attribute) (matflow.InputFileGenerator attribute) (matflow.OutputFileParser attribute) environment_presets (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) environments (matflow.Action attribute) (matflow.ElementResources attribute) (matflow.ElementSet attribute) (matflow.ResourceSpec property) (matflow.Submission property) (matflow.WorkflowTemplate attribute) EnvironmentsList (class in matflow) ERROR_COLOUR (matflow.CompactProblemFormatter attribute) EULER (matflow.param_classes.orientations.OrientationRepresentationType attribute) euler() (matflow.param_classes.orientations.OrientationRepresentation class method) euler_definition (matflow.param_classes.orientations.OrientationRepresentation attribute) euler_is_degrees (matflow.param_classes.orientations.OrientationRepresentation attribute) EulerDefinition (class in matflow.param_classes.orientations) example_uniaxial() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) Executable (class in matflow) executable (matflow.Command attribute) executable_extension (matflow.ElementResources attribute) ExecutableInstance (class in matflow) executables (matflow.Environment attribute) ExecutablesList (class in matflow) execute_combined_runs() (matflow.Workflow method) execute_run() (matflow.Workflow method) execution_path (matflow.Workflow property) Executor (class in matflow) exit_code (matflow.ElementActionRun property) expand() (matflow.Action method) EXPLICIT (matflow.ParameterPropagationMode attribute) ext (matflow.FileNameSpec property) (matflow.FileSpec property) extension (matflow.InputFile property) (matflow.InputFileGeneratorSource property) (matflow.OutputFileParserSource property)

F

file (matflow.InputFile attribute) (matflow.InputFileGeneratorSource attribute) (matflow.OutputFileParserSource attribute) FILE_NAME matflow-data-cache command line option matflow-data-copy command line option matflow-data-purge command line option matflow-data-recache command line option matflow-program-cache command line option matflow-program-copy command line option matflow-program-purge command line option matflow-program-recache command line option file_name (matflow.FileNameExt attribute) (matflow.FileNameStem attribute) FILE_PATH matflow-config-import command line option FileNameExt (class in matflow) FileNameSpec (class in matflow) FileNameStem (class in matflow) FileSpec (class in matflow) filter() (matflow.ElementFilter method) filter_instances() (matflow.Executable method) fit() (matflow.param_classes.surrogate.Surrogate method) format_directives() (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) format_switch() (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) from_file() (matflow.InputValue class method) (matflow.param_classes.moose.MooseInputDeck class method) (matflow.param_classes.orientations.Orientations class method) (matflow.param_classes.seeds.MicrostructureSeeds class method) (matflow.ValueSequence class method) (matflow.Workflow class method) (matflow.WorkflowTemplate class method) from_geometric_space() (matflow.InputValue class method) (matflow.ValueSequence class method) from_hex_convention_DAMASK() (matflow.param_classes.orientations.UnitCellAlignment class method) from_hex_convention_MTEX() (matflow.param_classes.orientations.UnitCellAlignment class method) from_JSON_file() (matflow.Workflow class method) (matflow.WorkflowTemplate class method) from_json_like() (matflow.Action class method) (matflow.ActionEnvironment class method) (matflow.ActionRule class method) (matflow.ActionScope class method) (matflow.Command class method) (matflow.CommandFilesList class method) (matflow.ElementFilter class method) (matflow.ElementGroup class method) (matflow.ElementResources class method) (matflow.ElementSet class method) (matflow.Environment class method) (matflow.EnvironmentsList class method) (matflow.Executable class method) (matflow.ExecutableInstance class method) (matflow.ExecutablesList class method) (matflow.FileNameExt class method) (matflow.FileNameSpec class method) (matflow.FileNameStem class method) (matflow.FileSpec class method) (matflow.GroupList class method) (matflow.Import class method) (matflow.ImportParameter class method) (matflow.InputFile class method) (matflow.InputFileGenerator class method) (matflow.InputFileGeneratorSource class method) (matflow.InputSource class method) (matflow.InputValue class method) (matflow.Jobscript class method) (matflow.JobscriptBlock class method) (matflow.Loop class method) (matflow.MetaTask class method) (matflow.MetaTaskSchema class method) (matflow.MultiPathSequence class method) (matflow.NumCores class method) (matflow.OutputFileParser class method) (matflow.OutputFileParserSource class method) (matflow.OutputLabel class method)

from_JSON_like() (matflow.param_classes.orientations.Orientations class method) (matflow.param_classes.seeds.MicrostructureSeeds class method) from_json_like() (matflow.Parameter class method) (matflow.ParameterPath class method) (matflow.ParametersList class method) (matflow.ResourceList class method) (matflow.ResourceSpec class method) (matflow.Rule class method) (matflow.SchemaInput class method) (matflow.SchemaOutput class method) (matflow.SchemaParameter class method) (matflow.Submission class method) (matflow.Task class method) (matflow.TaskList class method) (matflow.TaskObjective class method) (matflow.TaskSchema class method) (matflow.TaskSchemasList class method) (matflow.TaskTemplateList class method) (matflow.ValuePerturbation class method) (matflow.ValueSequence class method) (matflow.WorkflowLoopList class method) (matflow.WorkflowTaskList class method) (matflow.WorkflowTemplate class method) from_JSON_string() (matflow.Workflow class method) (matflow.WorkflowTemplate class method) from_latin_hypercube() (matflow.MultiPathSequence class method) from_linear_space() (matflow.InputValue class method) (matflow.ValueSequence class method) from_load_txt() (matflow.InputValue class method) (matflow.ValueSequence class method) from_log_normal() (matflow.InputValue class method) (matflow.ValueSequence class method) from_log_space() (matflow.InputValue class method) (matflow.ValueSequence class method) from_normal() (matflow.InputValue class method) (matflow.ValueSequence class method) from_npz_file() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) from_random() (matflow.param_classes.orientations.Orientations class method) (matflow.param_classes.seeds.MicrostructureSeeds class method) from_random_uniform() (matflow.InputValue class method) (matflow.ValueSequence class method) from_range() (matflow.InputValue class method) (matflow.ValueSequence class method) from_rectangle() (matflow.InputValue class method) (matflow.ValueSequence class method) from_spec() (matflow.ExecutableInstance class method) (matflow.ValuePerturbation class method) from_string() (matflow.InputSource class method) (matflow.param_classes.moose.MooseInputDeck class method) from_template() (matflow.Workflow class method) from_template_data() (matflow.Workflow class method) from_uniform() (matflow.InputValue class method) (matflow.ValueSequence class method) from_YAML_file() (matflow.Workflow class method) (matflow.WorkflowTemplate class method) from_YAML_string() (matflow.Workflow class method) (matflow.WorkflowTemplate class method) fromkeys() (matflow.param_classes.single_crystal_parameters.Perturbation method) full_info (matflow.MetaTaskSchema property) (matflow.TaskSchema property)

G

generate_data_index() (matflow.Action method) generate_new_elements() (matflow.WorkflowTask method) generate_sobol() (matflow.param_classes.surrogate.Surrogate method) generator (matflow.InputFileGeneratorSource attribute) get() (matflow.CommandFilesList method) (matflow.Element method) (matflow.ElementAction method) (matflow.ElementActionRun method) (matflow.ElementIteration method) (matflow.EnvironmentsList method) (matflow.ExecutablesList method) (matflow.GroupList method) (matflow.param_classes.single_crystal_parameters.Perturbation method) (matflow.ParametersList method) (matflow.ResourceList method) (matflow.TaskList method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.WorkflowLoopList method) (matflow.WorkflowTask method) (matflow.WorkflowTaskList method) get_action_parameter_flow() (matflow.MetaTaskSchema method) (matflow.TaskSchema method) get_action_rules() (matflow.InputFileGenerator method) (matflow.OutputFileParser method) get_active_jobscripts() (matflow.Submission method) get_active_states() (matflow.Jobscript method) get_all() (matflow.CommandFilesList method) (matflow.EnvironmentsList method) (matflow.ExecutablesList method) (matflow.GroupList method) (matflow.ParametersList method) (matflow.ResourceList method) (matflow.TaskList method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.WorkflowLoopList method) (matflow.WorkflowTaskList method) get_all_EARs() (matflow.Workflow method) get_all_element_iterations() (matflow.Workflow method) (matflow.WorkflowTask method) get_all_elements() (matflow.Workflow method) get_all_parameter_data() (matflow.Workflow method) get_all_parameter_sources() (matflow.Workflow method) get_all_parameters() (matflow.Workflow method) get_all_previous_iteration_runs() (matflow.ElementActionRun method) get_all_submission_run_IDs() (matflow.Workflow method) get_app_log_file_name() (matflow.Submission static method) get_app_log_file_path() (matflow.Submission class method) get_app_log_path() (matflow.ElementActionRun method) (matflow.Submission class method) get_app_std_path() (matflow.ElementActionRun method) (matflow.Jobscript method) (matflow.Submission class method) get_available_import_sources() (matflow.WorkflowTemplate method) get_available_task_input_sources() (matflow.Task method) get_block_act_idx_shell_vars() (matflow.Action class method) get_by_key() (matflow.MetaTaskSchema class method) (matflow.TaskSchema class method) get_child_loops() (matflow.WorkflowLoop method) get_command_file_labels() (matflow.Action method) get_command_input_types() (matflow.Action method) get_command_line() (matflow.Command method) get_command_output_types() (matflow.Action method) get_command_parameter_types() (matflow.Action method) get_commands_action_env() (matflow.Action method) get_commands_file_hash() (matflow.Action method) (matflow.ElementActionRun method) get_commands_file_name() (matflow.Jobscript method) (matflow.RunDirAppFiles class method) get_commands_path() (matflow.Submission class method) get_console() (matflow.CompactProblemFormatter method) get_data_idx() (matflow.Element method) (matflow.ElementAction method) (matflow.ElementActionRun method) (matflow.ElementIteration method) get_data_in_values() (matflow.ElementActionRun method) get_data_in_values_direct() (matflow.ElementActionRun method) get_decoders() (in module matflow.encoders) get_default_CPU_arch() (matflow.ElementResources class method) get_default_executable_extension() (matflow.ElementResources class method) get_default_os_name() (matflow.ElementResources static method) get_default_platform() (matflow.ElementResources class method) get_default_scheduler() (matflow.ElementResources class method) get_default_shell() (matflow.ElementResources class method) get_defined_parameter_types() (matflow.ElementSet method) get_defined_sub_parameter_types() (matflow.ElementSet method) get_dependent_EARs() (matflow.Element method) (matflow.ElementActionRun method) (matflow.ElementIteration method) get_dependent_element_iterations() (matflow.Element method) (matflow.ElementIteration method) get_dependent_elements() (matflow.Element method) (matflow.ElementIteration method) (matflow.WorkflowTask method) get_dependent_elements_recursively() (matflow.Element method) get_dependent_tasks() (matflow.Element method) (matflow.ElementIteration method) (matflow.WorkflowTask method) get_dir_name() (matflow.WorkflowTask method) get_directory() (matflow.ElementActionRun method) get_EAR_dependencies() (matflow.Element method) (matflow.ElementActionRun method) (matflow.ElementIteration method) get_EAR_IDs_of_tasks() (matflow.Workflow method) get_EAR_skipped() (matflow.Workflow method) get_EARs_from_IDs() (matflow.Workflow method) get_EARs_of_tasks() (matflow.Workflow method) get_element_dependencies() (matflow.Element method) (matflow.ElementIteration method) (matflow.WorkflowTask method) get_element_IDs() (matflow.WorkflowLoop method) get_element_IDs_from_EAR_IDs() (matflow.Workflow method) get_element_iteration_dependencies() (matflow.Element method) (matflow.ElementIteration method) get_element_iteration_IDs_from_EAR_IDs() (matflow.Workflow method) get_element_iterations_from_IDs() (matflow.Workflow method) get_element_iterations_of_tasks() (matflow.Workflow method) get_elements() (matflow.WorkflowLoop method) get_elements_from_IDs() (matflow.Workflow method) get_encoders() (in module matflow.encoders) get_end_time() (matflow.Submission method) get_env_instance_filterable_attributes() (matflow.ElementResources static method) get_environment() (matflow.Action method) (matflow.ElementActionRun method) get_environment_name() (matflow.Action method) get_environment_spec() (matflow.Action method) (matflow.ElementActionRun method) get_id() (matflow.Environment static method) get_IFG_input_values() (matflow.ElementActionRun method) get_import_parameter_from_type() (matflow.Import method) get_info_html() (matflow.MetaTaskSchema method) (matflow.TaskSchema method) get_input_dependencies() (matflow.Element method) (matflow.ElementActionRun method) (matflow.ElementIteration method) get_input_file_generator_action_env() (matflow.Action method) get_input_file_labels() (matflow.Action method) get_input_output_file_command_args() (matflow.Action method) get_input_output_file_paths() (matflow.Action method) get_input_statuses() (matflow.Task method) get_input_types() (matflow.Action method) get_iteration_task_pathway() (matflow.Workflow method)

get_jinja_template_inputs() (matflow.Action method) get_jinja_template_resolved_path() (matflow.Action method) get_job_state_info() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) get_job_statuses() (matflow.SGEPosix method) get_jobscript_functions_name() (matflow.Submission method) get_jobscript_functions_path() (matflow.Submission method) get_jobscript_hash() (matflow.ElementResources method) get_js_funcs_path() (matflow.Submission class method) get_js_path() (matflow.Submission class method) get_js_run_ids_path() (matflow.Submission class method) get_js_script_indices_path() (matflow.Submission class method) get_js_std_path() (matflow.Submission class method) get_js_win_pids_path() (matflow.Submission class method) get_key() (matflow.MetaTaskSchema method) (matflow.TaskSchema method) get_known_submissions() (in module matflow) get_locally_defined_inputs() (matflow.ElementSet method) get_login_nodes() (matflow.SGEPosix method) get_OFP_output_files() (matflow.ElementActionRun method) get_OFP_outputs() (matflow.ElementActionRun method) get_OS_info() (in module matflow) get_output_file_labels() (matflow.Action method) get_output_file_parser_action_env() (matflow.Action method) get_output_types() (matflow.Action method) (matflow.Command method) get_param_dump_file_path_HDF5() (matflow.Action method) get_param_dump_file_path_JSON() (matflow.Action method) get_param_load_file_path_HDF5() (matflow.Action method) get_param_load_file_path_JSON() (matflow.Action method) get_param_provided_element_sets() (matflow.Task method) get_parameter() (matflow.Workflow method) get_parameter_data() (matflow.Workflow method) get_parameter_dependence() (matflow.Action method) (matflow.MetaTaskSchema method) (matflow.TaskSchema method) get_parameter_names() (matflow.Action method) (matflow.ElementAction method) (matflow.ElementActionRun method) (matflow.ElementIteration method) get_parameter_set_statuses() (matflow.Workflow method) get_parameter_source() (matflow.Workflow method) get_parameter_sources() (matflow.Element method) (matflow.ElementAction method) (matflow.ElementActionRun method) (matflow.ElementIteration method) (matflow.Workflow method) get_parameters() (matflow.Import method) (matflow.Workflow method) get_parent_loops() (matflow.WorkflowLoop method) get_path() (matflow.Submission class method) get_possible_scopes() (matflow.Action method) get_precise_scope() (matflow.Action method) get_prefixed_data_names() (matflow.Action method) get_prefixed_data_names_flat() (matflow.Action method) get_process_IDs() (matflow.Submission method) (matflow.Workflow method) get_py_script_func_kwargs() (matflow.ElementActionRun method) get_required_executables() (matflow.Action method) (matflow.Command method) get_resources() (matflow.ElementActionRun method) (matflow.ElementIteration method) get_resources_obj() (matflow.ElementIteration method) get_run_directories() (matflow.Workflow method) get_run_file_prefix() (matflow.RunDirAppFiles static method) get_run_param_dump_file_prefix() (matflow.RunDirAppFiles class method) get_run_param_load_file_prefix() (matflow.RunDirAppFiles class method) get_running_elements() (matflow.Workflow method) get_running_runs() (matflow.Workflow method) get_scheduler_job_IDs() (matflow.Submission method) (matflow.Workflow method) get_schema_action() (matflow.Task method) get_scopes() (matflow.ResourceList method) get_script_artifact_name() (matflow.Action method) (matflow.ElementActionRun method) get_script_determinant_hash() (matflow.Action method) get_script_determinants() (matflow.Action method) get_script_name() (matflow.Action class method) get_scripts_path() (matflow.Submission class method) get_sequence_from_path() (matflow.ElementSet method) get_sequence_value() (matflow.Element method) get_shell_info() (in module matflow) get_size() (matflow.ElementParameter method) get_snippet_script_path() (matflow.Action class method) get_snippet_script_str() (matflow.Action class method) get_specs_fmt() (matflow.Environment static method) get_start_time() (matflow.Submission method) get_std_out_err_filename() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) get_std_out_err_path() (matflow.Jobscript method) get_stderr() (matflow.Jobscript method) get_stderr_filename() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) get_stderr_path() (matflow.Jobscript method) get_stdout() (matflow.Jobscript method) get_stdout_filename() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) get_stdout_path() (matflow.Jobscript method) get_store_EARs() (matflow.Workflow method) get_store_element_iterations() (matflow.Workflow method) get_store_elements() (matflow.Workflow method) get_store_tasks() (matflow.Workflow method) get_submit_command() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) get_task() (matflow.InputSource method) get_task_dependencies() (matflow.Element method) (matflow.ElementIteration method) (matflow.ElementSet method) (matflow.WorkflowTask method) get_task_elements() (matflow.Workflow method) get_task_IDs_from_element_IDs() (matflow.Workflow method) get_task_loop_idx_array() (matflow.JobscriptBlock method) get_task_unique_names() (matflow.Task static method) (matflow.Workflow method) get_template_resources() (matflow.ElementIteration method) get_text_file() (matflow.Workflow method) get_tmp_path() (matflow.Submission class method) get_unique_schedulers() (matflow.Submission method) get_unique_schedulers_of_jobscripts() (matflow.Submission static method) get_unique_shells() (matflow.Submission method) get_unscaled_data() (matflow.param_classes.surrogate.Surrogate method) get_version_info() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) group_by_distinct (matflow.ElementGroup attribute) GroupList (class in matflow) groups (matflow.ElementSet attribute)

H

has_jinja_template (matflow.Action property)

has_main_script_or_program (matflow.Action property) has_program (matflow.Action property)

I

ID matflow-env-info command line option matflow-env-remove command line option matflow-env-show command line option id (matflow.Environment property) id_ (matflow.Element property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.Workflow property) ignore_invalid_actions() (matflow.MetaTaskSchema class method) (matflow.TaskSchema class method) implementation (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) IMPLICIT (matflow.ParameterPropagationMode attribute) Import (class in matflow) IMPORT (matflow.InputSourceType attribute) import_ (matflow.ImportParameter property) import_() (matflow.InputSource class method) import_ref (matflow.InputSource attribute) ImportParameter (class in matflow) imports (matflow.WorkflowTemplate attribute) INDEX matflow-config-pop command line option matflow-workflow-WORKFLOW_REF-get-param command line option matflow-workflow-WORKFLOW_REF-get-param-source command line option matflow-workflow-WORKFLOW_REF-is-param-set command line option index (matflow.Element property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ElementSet property) (matflow.Jobscript property) (matflow.JobscriptBlock property) (matflow.Submission property) (matflow.Task property) (matflow.WorkflowLoop property) (matflow.WorkflowTask property) info (matflow.MetaTaskSchema property) (matflow.TaskSchema property) initialise_EARs() (matflow.WorkflowTask method) INPUT (matflow.TaskSourceType attribute) input_file (matflow.InputFileGenerator attribute) INPUT_FILE_GENERATOR (matflow.ActionScopeType attribute) input_file_generator() (matflow.ActionScope class method) input_file_generators (matflow.Action attribute) input_files (matflow.Action attribute) (matflow.Element property) (matflow.ElementAction property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ElementSet attribute) input_files_path (matflow.Workflow property) input_or_output (matflow.SchemaInput property) (matflow.SchemaOutput property) input_path (matflow.ValueSequence property) input_source_idx (matflow.Element property) input_sources (matflow.Element property) (matflow.ElementPropagation attribute) (matflow.ElementSet attribute) input_type (matflow.ValueSequence property) input_type_labels_map (matflow.MetaTaskSchema property) (matflow.TaskSchema property)

input_types (matflow.ElementSet property) (matflow.MetaTaskSchema property) (matflow.TaskSchema property) InputFile (class in matflow) InputFileGenerator (class in matflow) InputFileGeneratorSource (class in matflow) inputs (matflow.Element property) (matflow.ElementAction property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ElementSet attribute) (matflow.InputFileGenerator attribute) (matflow.MetaTaskSchema attribute) (matflow.OutputFileParser attribute) (matflow.TaskSchema attribute) (matflow.WorkflowTask property) InputSource (class in matflow) InputSourceType (class in matflow) InputValue (class in matflow) insert_ID (matflow.Task property) (matflow.WorkflowTask property) instances (matflow.Executable attribute) INTER_STATE_QUERY_DELAY (matflow.SlurmPosix attribute) ipython_shell (matflow.CompactProblemFormatter property) is_array (matflow.Jobscript property) is_creation (matflow.ElementSet attribute) is_file (matflow.Parameter attribute) is_IFG (matflow.Action property) is_in() (matflow.InputSource method) is_input_type_provided() (matflow.ElementSet method) is_input_type_required() (matflow.Action method) (matflow.Task method) is_jobscript_active() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) is_num_cores_supported() (matflow.DirectPosix static method) (matflow.DirectWindows static method) (matflow.QueuedScheduler static method) (matflow.SGEPosix static method) (matflow.SlurmPosix static method) is_OFP (matflow.Action property) is_parallel (matflow.ElementResources property) is_parameter_set() (matflow.Workflow method) is_pending (matflow.Element property) (matflow.ElementActionRun property) (matflow.ElementIteration property) is_regex (matflow.FileNameSpec attribute) is_scheduled (matflow.Jobscript property) (matflow.Submission property) is_set (matflow.ElementParameter property) is_snippet_script (matflow.ElementActionRun property) is_snippet_script() (matflow.Action static method) is_sub_value (matflow.InputValue property) (matflow.ValueSequence property) is_submitted (matflow.Jobscript property) isolated_app_config() (in module matflow.tests.conftest) items() (matflow.param_classes.single_crystal_parameters.Perturbation method) iterable_parameters (matflow.WorkflowLoop property) iteration_IDs (matflow.Element property) iterations (matflow.Element property)

J

jinja_template (matflow.Action attribute) (matflow.InputFileGenerator attribute) jinja_template_or_template_path (matflow.Action property) jinja_template_path (matflow.Action attribute) (matflow.InputFileGenerator attribute) jinja_template_path_actual (matflow.ElementActionRun property) Jobscript (class in matflow) jobscript_functions_name (matflow.Jobscript property) jobscript_functions_path (matflow.Jobscript property) JOBSCRIPT_IDX matflow-internal-workflow-PATH-execute-combined-runs command line option matflow-internal-workflow-PATH-execute-run command line option jobscript_indices (matflow.Submission property) jobscript_name (matflow.Jobscript property) jobscript_path (matflow.Jobscript property) JobscriptBlock (class in matflow)

jobscripts (matflow.Submission property) JS_DIR_NAME (matflow.Submission attribute) JS_FUNCS_DIR_NAME (matflow.Submission attribute) js_funcs_path (matflow.Submission property) JS_IDX matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-js command line option JS_parallelism (matflow.Submission property) js_path (matflow.Submission property) JS_RUN_IDS_DIR_NAME (matflow.Submission attribute) js_run_ids_path (matflow.Submission property) JS_SCRIPT_INDICES_DIR_NAME (matflow.Submission attribute) js_script_indices_path (matflow.Submission property) JS_STD_DIR_NAME (matflow.Submission attribute) js_std_path (matflow.Submission property) JS_WIN_PIDS_DIR_NAME (matflow.Submission attribute) js_win_pids_path (matflow.Submission property)

K

keys() (matflow.param_classes.single_crystal_parameters.Perturbation method) KNOWN_NAME matflow-config-init command line option

kwargs (matflow.ActionScope attribute)

L

label (matflow.Executable attribute) (matflow.FileSpec attribute) (matflow.InputValue attribute) (matflow.OutputLabel attribute) (matflow.ValueSequence attribute) labelled_info() (matflow.SchemaInput method) labelled_type (matflow.InputValue property) (matflow.ValueSequence property) labels (matflow.SchemaInput attribute) latest_iteration (matflow.Element property) latest_iteration_non_skipped (matflow.Element property) LatticeDirection (class in matflow.param_classes.orientations) list_attrs() (matflow.CommandFilesList method) (matflow.EnvironmentsList method) (matflow.ExecutablesList method) (matflow.GroupList method) (matflow.ParametersList method) (matflow.TaskList method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.WorkflowLoopList method) (matflow.WorkflowTaskList method)

list_jobscripts() (matflow.Submission method) (matflow.Workflow method) list_task_jobscripts() (matflow.Submission method) (matflow.Workflow method) load_case_1() (in module matflow.tests.conftest) LoadCase (class in matflow.param_classes.load) LoadStep (class in matflow.param_classes.load) LOCAL (matflow.InputSourceType attribute) local() (matflow.InputSource class method) LOG_DIR_NAME (matflow.Submission attribute) Loop (class in matflow) loop_idx (matflow.ElementIteration property) loop_skipped (matflow.ElementIteration property) loops (matflow.Workflow property) (matflow.WorkflowTemplate attribute)

M

MAIN (matflow.ActionScopeType attribute) main() (matflow.ActionScope class method) make_and_submit_demo_workflow() (in module matflow) make_and_submit_workflow() (in module matflow) make_demo_workflow() (in module matflow) make_persistent() (matflow.InputFile method) (matflow.InputFileGeneratorSource method) (matflow.InputValue method) (matflow.MetaTaskSchema method) (matflow.OutputFileParserSource method) (matflow.ResourceSpec method) (matflow.TaskSchema method) (matflow.ValuePerturbation method) (matflow.ValueSequence method) make_prediction() (matflow.param_classes.surrogate.Surrogate method) make_prediction_sobol() (matflow.param_classes.surrogate.Surrogate method) make_workflow() (in module matflow) masked_array_from_list() (in module matflow.param_classes.utils) matflow module matflow command line option --config-dir --config-key --help --hpcflow-version --run-time-info --std-stream --timeit --timeit-file --version --with-config matflow-cancel command line option --no-status --quiet --ref-type --status -r WORKFLOW_REF matflow-config command line option --no-callback matflow-config-add-scheduler command line option --defaults NAME matflow-config-add-shell command line option --defaults NAME matflow-config-add-shell-wsl command line option --defaults matflow-config-append command line option --json NAME VALUE matflow-config-get command line option --all --file --metadata NAME matflow-config-import command line option --new --no-rename --rename FILE_PATH matflow-config-init command line option --path KNOWN_NAME matflow-config-open command line option --path matflow-config-pop command line option INDEX NAME matflow-config-prepend command line option --json NAME VALUE matflow-config-set command line option --json NAME VALUE matflow-config-unset command line option NAME matflow-config-update command line option --json NAME VALUE matflow-data command line option --list -l matflow-data-cache command line option --all --exist-not-ok --exist-ok FILE_NAME matflow-data-copy command line option DESTINATION FILE_NAME matflow-data-install-cache command line option --overwrite SOURCE matflow-data-purge command line option --all --exist-ok --not-exist-ok FILE_NAME matflow-data-recache command line option --all --exist-ok --not-exist-ok FILE_NAME matflow-demo-software-doSomething command line option --infile1 --infile2 --out --value -i1 -i2 -o -v matflow-demo-workflow command line option --list -l matflow-demo-workflow-copy command line option --doc --no-doc DESTINATION WORKFLOW_NAME matflow-demo-workflow-go command line option --add-to-known --cancel --format --js-parallelism --name --name-dir --name-no-dir --name-no-timestamp --name-timestamp --no-add-to-known --no-status --overwrite --path --print-idx --quiet --status --store --tasks --ts-fmt --ts-name-fmt --var --wait -v WORKFLOW_NAME matflow-demo-workflow-make command line option --add-submission --format --name --name-dir --name-no-dir --name-no-timestamp --name-timestamp --no-status --overwrite --path --status --store --ts-fmt --ts-name-fmt --var -v WORKFLOW_NAME matflow-demo-workflow-show command line option --doc --no-doc --no-syntax --syntax WORKFLOW_NAME matflow-env-add command line option --env-source-file --file-name --no-replace --replace --setup --use-current NAME matflow-env-info command line option --label --name --specifier -l -n -s ATTRIBUTE ID matflow-env-remove command line option --label --name --specifier -l -n -s ID matflow-env-setup command line option --env-source-file matflow-env-setup-damask command line option --docker-archive --docker-exe --docker-image --singularity-archive --singularity-exe --singularity-sif matflow-env-setup-dream3d command line option --no-use-current --pipeline-runner-path --use-current -p matflow-env-setup-matlab command line option --mtex-path --path --runtime-path matflow-env-setup-moose command line option --docker-archive --docker-exe --docker-image --singularity-archive --singularity-exe --singularity-sif matflow-env-setup-python command line option --env-source-file --file-name --name --no-replace --no-use-current --replace --use-current -n matflow-env-setup-python-all command line option --no-replace --no-use-current --replace --use-current matflow-env-show command line option --label --name --specifier -l -n -s ID matflow-go command line option --add-to-known --cancel --format --js-parallelism --name --name-dir --name-no-dir --name-no-timestamp --name-timestamp --no-add-to-known --no-status --overwrite --path --print-idx --quiet --status --store --string --tasks --ts-fmt --ts-name-fmt --var --wait -v TEMPLATE_FILE_OR_STR matflow-helper-pid command line option --file -f matflow-helper-restart command line option --timeout --timeout-check-interval --watch-interval matflow-helper-run command line option --timeout --timeout-check-interval --watch-interval matflow-helper-start command line option --timeout --timeout-check-interval --watch-interval matflow-internal-noop command line option --click-exit-code --raise --sleep matflow-internal-workflow command line option PATH matflow-internal-workflow-PATH-execute-combined-runs command line option JOBSCRIPT_IDX SUBMISSION_IDX matflow-internal-workflow-PATH-execute-run command line option BLOCK_ACTION_IDX BLOCK_IDX JOBSCRIPT_IDX RUN_ID SUBMISSION_IDX matflow-internal-workflow-PATH-save-parameter command line option --stderr CMD_IDX EAR_ID NAME VALUE

matflow-make command line option --add-submission --format --name --name-dir --name-no-dir --name-no-timestamp --name-timestamp --no-status --overwrite --path --status --store --string --ts-fmt --ts-name-fmt --var -v TEMPLATE_FILE_OR_STR matflow-manage-cache-all command line option --exist-not-ok --exist-ok matflow-manage-clear-cache command line option --hostname matflow-manage-get-config-path command line option --config-dir matflow-manage-purge-all command line option --exist-ok --not-exist-ok matflow-manage-recache-all command line option --exist-ok --not-exist-ok matflow-manage-reset-config command line option --config-dir matflow-open-config command line option --path matflow-open-data-cache-dir command line option --path matflow-open-env-source command line option --name --path matflow-open-known-subs command line option --path matflow-open-log command line option --path matflow-open-program-cache-dir command line option --path matflow-open-user-cache-dir command line option --path matflow-open-user-cache-hostname-dir command line option --path matflow-open-user-data-dir command line option --path matflow-open-user-data-hostname-dir command line option --path matflow-open-user-runtime-dir command line option --path matflow-open-workflow command line option --path --ref-type -r WORKFLOW_REF matflow-program command line option --list -l matflow-program-cache command line option --all --exist-not-ok --exist-ok FILE_NAME matflow-program-copy command line option DESTINATION FILE_NAME matflow-program-install-cache command line option --overwrite SOURCE matflow-program-purge command line option --all --exist-ok --not-exist-ok FILE_NAME matflow-program-recache command line option --all --exist-ok --not-exist-ok FILE_NAME matflow-rechunk command line option --backup --chunk-size --no-backup --no-status --ref-type --status -r WORKFLOW_REF matflow-show command line option --full --legend --max-recent --no-update -f -r matflow-submission command line option --os-info matflow-submission-get-known command line option --json matflow-submission-scheduler command line option SCHEDULER_NAME matflow-submission-shell-info command line option --exclude-os SHELL_NAME matflow-test command line option --file PYTEST_ARGS matflow-test-hpcflow command line option --file PYTEST_ARGS matflow-unzip command line option --log --path WORKFLOW_PATH matflow-workflow command line option --ref-type -r WORKFLOW_REF matflow-workflow-WORKFLOW_REF-abort-run command line option --element --submission --task matflow-workflow-WORKFLOW_REF-add-submission command line option --force-array --js-parallelism --no-status --status --tasks matflow-workflow-WORKFLOW_REF-get-param command line option INDEX matflow-workflow-WORKFLOW_REF-get-param-source command line option INDEX matflow-workflow-WORKFLOW_REF-is-param-set command line option INDEX matflow-workflow-WORKFLOW_REF-list-jobscripts command line option --jobscripts --max-js --sub-idx --width matflow-workflow-WORKFLOW_REF-list-task-jobscripts command line option --max-js --sub-idx --task-names --width matflow-workflow-WORKFLOW_REF-rechunk command line option --backup --chunk-size --no-backup --no-status --status matflow-workflow-WORKFLOW_REF-rechunk-parameter-base command line option --backup --chunk-size --no-backup --no-status --status matflow-workflow-WORKFLOW_REF-rechunk-runs command line option --backup --chunk-size --no-backup --no-status --status matflow-workflow-WORKFLOW_REF-sub command line option SUB_IDX matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-js command line option JS_IDX matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-js-JS_IDX-stderr command line option --array-idx matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-js-JS_IDX-stdout command line option --array-idx matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-jobscripts command line option --jobscripts --max-js --width matflow-workflow-WORKFLOW_REF-sub-SUB_IDX-list-task-jobscripts command line option --max-js --task-names --width matflow-workflow-WORKFLOW_REF-submit command line option --add-to-known --cancel --js-parallelism --no-add-to-known --no-status --print-idx --quiet --status --tasks --wait matflow-workflow-WORKFLOW_REF-unzip command line option --log --path matflow-workflow-WORKFLOW_REF-wait command line option --jobscripts --quiet -j matflow-workflow-WORKFLOW_REF-zip command line option --include-execute --include-rechunk-backups --log --overwrite --path matflow-zip command line option --include-execute --include-rechunk-backups --log --overwrite --path --ref-type -r WORKFLOW_REF matflow.cli module matflow.encoders module matflow.environments module matflow.param_classes module matflow.param_classes.load module matflow.param_classes.moose module matflow.param_classes.orientations module matflow.param_classes.seeds module matflow.param_classes.single_crystal_parameters module matflow.param_classes.surrogate module matflow.param_classes.utils module matflow.pytest_plugin module matflow.tests module matflow.tests.conftest module matflow.tests.data module matflow.tests.test_cli module matflow.tests.test_encoders_decoders module matflow.tests.test_utils module matflow.tests.utils module max_array_items (matflow.ElementResources attribute) (matflow.ResourceSpec property) merge_envs (matflow.Task attribute) (matflow.WorkflowTemplate attribute) merge_one() (matflow.ResourceList method) merge_other() (matflow.ResourceList method) merge_resources (matflow.WorkflowTemplate attribute) metadata (matflow.ElementActionRun property) MetaTask (class in matflow) MetaTaskSchema (class in matflow) method (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) method_args (matflow.param_classes.load.LoadStep property) method_name (matflow.param_classes.load.LoadStep property) MicrostructureSeeds (class in matflow.param_classes.seeds) modifiable_config() (in module matflow.tests.conftest) module matflow matflow.cli matflow.encoders matflow.environments matflow.param_classes matflow.param_classes.load matflow.param_classes.moose matflow.param_classes.orientations matflow.param_classes.seeds matflow.param_classes.single_crystal_parameters matflow.param_classes.surrogate matflow.param_classes.utils matflow.pytest_plugin matflow.tests matflow.tests.conftest matflow.tests.data matflow.tests.test_cli matflow.tests.test_encoders_decoders matflow.tests.test_utils matflow.tests.utils MooseBlock (class in matflow.param_classes.moose) MooseInputDeck (class in matflow.param_classes.moose) multi_input_types (matflow.MetaTaskSchema property) (matflow.TaskSchema property) multi_path_sequences (matflow.ElementSet attribute) MultiPathSequence (class in matflow) multiple (matflow.SchemaInput attribute) multiplicative (matflow.param_classes.single_crystal_parameters.Perturbation attribute) multiplicative_factor (matflow.ValuePerturbation attribute) multistep() (matflow.param_classes.load.LoadCase class method) multistep_random_inc() (matflow.param_classes.load.LoadCase class method)

N

NAME matflow-config-add-scheduler command line option matflow-config-add-shell command line option matflow-config-append command line option matflow-config-get command line option matflow-config-pop command line option matflow-config-prepend command line option matflow-config-set command line option matflow-config-unset command line option matflow-config-update command line option matflow-env-add command line option matflow-internal-workflow-PATH-save-parameter command line option name (matflow.ElementGroup attribute) (matflow.Environment attribute) (matflow.FileNameSpec attribute) (matflow.FileSpec attribute) (matflow.Loop property) (matflow.MetaTaskSchema property) (matflow.Task property) (matflow.TaskObjective attribute) (matflow.TaskSchema property) (matflow.ValuePerturbation attribute) (matflow.Workflow property) (matflow.WorkflowLoop property) (matflow.WorkflowTask property) (matflow.WorkflowTemplate attribute) names() (matflow.TaskSourceType class method) needs_app_log_dir (matflow.Submission property) needs_script_indices_dir (matflow.Submission property) needs_submit (matflow.Submission property) needs_win_pids_dir (matflow.Submission property) nesting_order (matflow.ElementPropagation attribute) (matflow.ElementSet attribute) (matflow.ValueSequence attribute) NEVER (matflow.ParameterPropagationMode attribute) new_empty_loop() (matflow.WorkflowLoop class method) new_empty_task() (matflow.WorkflowTask class method) non_iterable_parameters (matflow.Loop property) non_universal_input_types (matflow.Task property) normal_direction (matflow.param_classes.load.LoadStep attribute) normalise() (matflow.ResourceList class method) normalised_files_path (matflow.InputFile property)

normalised_inputs_path (matflow.InputValue property) (matflow.ValueSequence property) normalised_path (matflow.InputFile property) (matflow.InputFileGeneratorSource property) (matflow.InputValue property) (matflow.OutputFileParserSource property) (matflow.ResourceSpec property) (matflow.ValuePerturbation property) (matflow.ValueSequence property) normalised_resources_path (matflow.ResourceSpec property) num_actions (matflow.JobscriptBlock property) (matflow.WorkflowTask property) num_added_iterations (matflow.WorkflowLoop property) num_added_tasks (matflow.Workflow property) num_all_schema_actions (matflow.Task property) num_cores (matflow.ElementResources attribute) (matflow.ExecutableInstance attribute) (matflow.ResourceSpec property) num_cores_per_node (matflow.ElementResources attribute) (matflow.ResourceSpec property) num_EARs (matflow.Workflow property) num_element_iterations (matflow.Workflow property) num_element_sets (matflow.Task property) (matflow.WorkflowTask property) num_elements (matflow.JobscriptBlock property) (matflow.Workflow property) (matflow.WorkflowTask property) num_increments (matflow.param_classes.load.LoadStep attribute) num_iterations (matflow.Loop property) (matflow.WorkflowLoop property) num_loops (matflow.Workflow property) num_nodes (matflow.ElementResources attribute) (matflow.ResourceSpec property) num_runs (matflow.ElementAction property) num_seeds (matflow.param_classes.seeds.MicrostructureSeeds property) NUM_STATE_QUERY_TRIES (matflow.SlurmPosix attribute) num_steps (matflow.param_classes.load.LoadCase property) num_submissions (matflow.Workflow property) num_tasks (matflow.Workflow property) num_threads (matflow.ElementResources attribute) (matflow.ResourceSpec property) number (matflow.ElementRepeats attribute) NumCores (class in matflow)

O

objective (matflow.MetaTaskSchema attribute) (matflow.Task property) (matflow.TaskSchema attribute) options (matflow.OutputFileParser attribute) OrientationRepresentation (class in matflow.param_classes.orientations) OrientationRepresentationType (class in matflow.param_classes.orientations) Orientations (class in matflow.param_classes.orientations) orientations (matflow.param_classes.seeds.MicrostructureSeeds attribute) orientations_1() (in module matflow.tests.conftest) orientations_2() (in module matflow.tests.conftest) os_name (matflow.ElementResources attribute) (matflow.Jobscript property) (matflow.ResourceSpec property) output (matflow.OutputFileParser attribute) OUTPUT (matflow.TaskSourceType attribute) OUTPUT_FILE_PARSER (matflow.ActionScopeType attribute) output_file_parser() (matflow.ActionScope class method) output_file_parsers (matflow.Action attribute) output_files (matflow.Action attribute) (matflow.Element property) (matflow.ElementAction property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.OutputFileParser attribute)

output_labels (matflow.Task property) output_parameters (matflow.WorkflowLoop property) output_types (matflow.MetaTaskSchema property) (matflow.TaskSchema property) OutputFileParser (class in matflow) OutputFileParserSource (class in matflow) OutputLabel (class in matflow) outputs (matflow.Element property) (matflow.ElementAction property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.MetaTaskSchema attribute) (matflow.OutputFileParser attribute) (matflow.TaskSchema attribute) (matflow.WorkflowTask property) outstanding_jobscripts (matflow.Submission property)

P

parallel_mode (matflow.ElementResources attribute) (matflow.ExecutableInstance attribute) (matflow.ResourceSpec property) Parameter (class in matflow) parameter (matflow.InputValue attribute) (matflow.OutputLabel attribute) (matflow.SchemaInput attribute) (matflow.SchemaOutput attribute) (matflow.SubParameter attribute) (matflow.ValueSequence property) parameter_class_modules (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) ParameterPath (class in matflow) ParameterPropagationMode (class in matflow) Parameters (class in matflow) ParametersList (class in matflow) ParameterValue (class in matflow) parent (matflow.ElementParameter attribute) parents (matflow.WorkflowLoop property) parse_from_string() (matflow.param_classes.moose.MooseInputDeck static method) parse_submission_output() (matflow.DirectPosix method) (matflow.DirectWindows method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) parser (matflow.OutputFileParserSource attribute) PATH matflow-internal-workflow command line option path (matflow.ElementParameter attribute) (matflow.InputFile property) (matflow.InputFileGeneratorSource property) (matflow.InputSource attribute) (matflow.InputValue attribute) (matflow.OutputFileParserSource property) (matflow.param_classes.single_crystal_parameters.Perturbation attribute) (matflow.ParameterPath attribute) (matflow.Parameters attribute) (matflow.Rule attribute) (matflow.Submission property) (matflow.ValuePerturbation attribute) (matflow.ValueSequence attribute) path_split (matflow.ValueSequence property) path_type (matflow.ValueSequence property) perform_inference() (matflow.param_classes.surrogate.Surrogate method) Perturbation (class in matflow.param_classes.single_crystal_parameters) perturbations (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters property) phase_label (matflow.param_classes.seeds.MicrostructureSeeds attribute) phases (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters property) planar_2D() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) plane_strain() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) platform (matflow.ElementResources attribute) pop() (matflow.param_classes.single_crystal_parameters.Perturbation method) popitem() (matflow.param_classes.single_crystal_parameters.Perturbation method) port_number (matflow.ElementActionRun property)

position (matflow.param_classes.seeds.MicrostructureSeeds attribute) prefixed_names_unlabelled (matflow.ElementInputFiles property) (matflow.ElementInputs property) (matflow.ElementOutputFiles property) (matflow.ElementOutputs property) prefixed_names_unlabelled_str (matflow.ElementInputFiles property) (matflow.ElementInputs property) (matflow.ElementOutputFiles property) (matflow.ElementOutputs property) prepare_element_resolution() (matflow.Task method) prepare_JSON_dump() (matflow.param_classes.load.LoadCase method) (matflow.param_classes.load.LoadStep method) (matflow.param_classes.moose.MooseInputDeck method) (matflow.param_classes.orientations.OrientationRepresentation method) (matflow.param_classes.orientations.Orientations method) (matflow.param_classes.orientations.UnitCellAlignment method) (matflow.param_classes.seeds.MicrostructureSeeds method) (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters method) (matflow.param_classes.surrogate.Surrogate method) (matflow.ParameterValue method) prepare_persistent_copy() (matflow.ElementSet method) print_stderr() (matflow.Jobscript method) print_stdout() (matflow.Jobscript method) process_action_data_formats() (matflow.Action method) process_ID (matflow.Jobscript property) process_resources() (matflow.DirectPosix class method) (matflow.DirectWindows class method) (matflow.QueuedScheduler method) (matflow.SGEPosix class method) (matflow.SlurmPosix class method) process_shell_parameter_output() (matflow.Workflow method) process_std_stream() (matflow.Command method) PROCESSING (matflow.ActionScopeType attribute) processing() (matflow.ActionScope class method) program (matflow.Action attribute) program_data_in (matflow.Action attribute) program_data_in_grouped (matflow.Action property) program_data_in_has_files (matflow.Action property) program_data_out (matflow.Action attribute) program_data_out_grouped (matflow.Action property) program_data_out_has_files (matflow.Action property) program_exe (matflow.Action attribute) program_or_program_path (matflow.Action property) program_path (matflow.Action attribute) program_path_actual (matflow.ElementActionRun property) propagation_mode (matflow.SchemaOutput attribute) provides_parameters (matflow.MetaTaskSchema property) (matflow.TaskSchema property) provides_parameters() (matflow.Task method) pytensor_config_cxx (matflow.param_classes.surrogate.Surrogate attribute) pytest_addoption() (in module matflow.pytest_plugin) PYTEST_ARGS matflow-test command line option matflow-test-hpcflow command line option pytest_collection_modifyitems() (in module matflow.tests.conftest) pytest_configure() (in module matflow.pytest_plugin) pytest_generate_tests() (in module matflow.tests.conftest)

Q

q (matflow.Executor property) quat_order (matflow.param_classes.orientations.OrientationRepresentation attribute) quat_sample_random() (matflow.param_classes.orientations.Orientations static method)

QUATERNION (matflow.param_classes.orientations.OrientationRepresentationType attribute) quaternion() (matflow.param_classes.orientations.OrientationRepresentation class method) QuatOrder (class in matflow.param_classes.orientations) QueuedScheduler (class in matflow)

R

raise_on_failure_threshold() (matflow.ElementActionRun method) raise_on_missing (matflow.Parameters attribute) raise_on_unset (matflow.Parameters attribute) random_2D() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) random_3D() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) random_inc() (matflow.param_classes.load.LoadStep class method) random_seed (matflow.param_classes.seeds.MicrostructureSeeds attribute) read_contents() (matflow.InputFile method) (matflow.InputFileGeneratorSource method) (matflow.OutputFileParserSource method) read_numeric_csv_file() (in module matflow.param_classes.utils) rechunk() (matflow.Workflow method) rechunk_parameter_base() (matflow.Workflow method) rechunk_runs() (matflow.Workflow method) reload() (matflow.Workflow method) reload_template_components() (in module matflow.tests.conftest) render_jinja_template() (matflow.Action method) (matflow.ElementActionRun method) repeats (matflow.ElementSet attribute) representation (matflow.param_classes.orientations.Orientations attribute) requires_dir (matflow.InputFileGenerator attribute) (matflow.OutputFileParser attribute) resolve_element_data_indices() (matflow.WorkflowTask static method) resolve_jobscripts() (matflow.Workflow method) resource_scope (matflow.ValueSequence property)

ResourceList (class in matflow) resources (matflow.ElementActionRun property) (matflow.ElementSet attribute) (matflow.Jobscript property) (matflow.WorkflowTemplate attribute) resources_id (matflow.ElementResources attribute) (matflow.ResourceSpec property) resources_with_defaults (matflow.ElementActionRun property) ResourceSpec (class in matflow) return_element_parameters (matflow.Parameters attribute) rotation (matflow.param_classes.load.LoadStep attribute) rotation_order (matflow.param_classes.orientations.EulerDefinition attribute) Rule (class in matflow) rule (matflow.ActionRule attribute) rules (matflow.Action attribute) (matflow.Command attribute) (matflow.ElementFilter attribute) (matflow.InputFileGenerator attribute) (matflow.OutputFileParser attribute) run() (matflow.Executor method) run_hostname (matflow.ElementActionRun property) run_hpcflow_tests() (in module matflow) RUN_ID matflow-internal-workflow-PATH-execute-run command line option run_tests() (in module matflow) RunDirAppFiles (class in matflow) runs (matflow.ElementAction property)

S

save_files (matflow.Action attribute) (matflow.OutputFileParser attribute) save_from_HDF5_group() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) (matflow.param_classes.moose.MooseInputDeck class method) (matflow.param_classes.orientations.OrientationRepresentation class method) (matflow.param_classes.orientations.Orientations class method) (matflow.param_classes.orientations.UnitCellAlignment class method) (matflow.param_classes.seeds.MicrostructureSeeds class method) (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters class method) (matflow.param_classes.surrogate.Surrogate class method) (matflow.ParameterValue class method) save_from_JSON() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) (matflow.param_classes.moose.MooseInputDeck class method) (matflow.param_classes.orientations.OrientationRepresentation class method) (matflow.param_classes.orientations.Orientations class method) (matflow.param_classes.orientations.UnitCellAlignment class method) (matflow.param_classes.seeds.MicrostructureSeeds class method) (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters class method) (matflow.param_classes.surrogate.Surrogate class method) (matflow.ParameterValue class method) save_parameter() (matflow.Workflow method) SCALAR_VECTOR (matflow.param_classes.orientations.QuatOrder attribute) scale_data() (matflow.param_classes.surrogate.Surrogate method) scheduler (matflow.ElementResources attribute) (matflow.Jobscript property) (matflow.ResourceSpec property) scheduler_args (matflow.ElementResources attribute) (matflow.ResourceSpec property) scheduler_job_ID (matflow.Jobscript property) scheduler_js_ref (matflow.Jobscript property) SCHEDULER_NAME matflow-submission-scheduler command line option scheduler_name (matflow.Jobscript property) schema (matflow.Task property) schema_parameters (matflow.Element property) (matflow.ElementIteration property) SchemaInput (class in matflow) SchemaOutput (class in matflow) SchemaParameter (class in matflow) schemas (matflow.Task property) scope (matflow.ActionEnvironment attribute) (matflow.ResourceSpec attribute) scratch (matflow.ElementResources attribute) (matflow.ResourceSpec property) script (matflow.Action attribute) (matflow.InputFileGenerator attribute) (matflow.OutputFileParser attribute) script_data_in (matflow.Action attribute) (matflow.InputFileGenerator attribute) script_data_in_grouped (matflow.Action property) script_data_in_has_direct (matflow.Action property) script_data_in_has_files (matflow.Action property) script_data_out (matflow.Action attribute) (matflow.InputFileGenerator attribute) script_data_out_grouped (matflow.Action property) script_data_out_has_direct (matflow.Action property) script_data_out_has_files (matflow.Action property) script_exe (matflow.Action attribute) script_is_python_snippet (matflow.Action property) script_pass_env_spec (matflow.Action attribute) (matflow.InputFileGenerator attribute) (matflow.OutputFileParser attribute) script_pass_workflow (matflow.Action attribute) SCRIPTS_DIR_NAME (matflow.Submission attribute) scripts_path (matflow.Submission property) seeds_1() (in module matflow.tests.conftest) send_abort() (matflow.Executor class method) sequence_idx (matflow.Element property) sequence_indices (matflow.MultiPathSequence property) sequences (matflow.ElementSet attribute) (matflow.MultiPathSequence property) set_defaults() (matflow.ElementResources method) set_EAR_end() (matflow.Workflow method) set_EAR_skip() (matflow.Workflow method) set_EAR_start() (matflow.Workflow method) set_EARs_initialised() (matflow.Workflow method) set_multi_run_ends() (matflow.Workflow method) set_multi_run_starts() (matflow.Workflow method) set_parameter_value() (matflow.Workflow method) set_parameter_values() (matflow.Workflow method) set_sequence_parameters() (matflow.Task method) setdefault() (matflow.param_classes.single_crystal_parameters.Perturbation method) setup (matflow.Environment attribute) setup_label (matflow.Environment attribute) SGE_parallel_env (matflow.ElementResources attribute) (matflow.ResourceSpec property) SGEPosix (class in matflow) shell (matflow.ElementResources attribute) (matflow.Jobscript property) (matflow.ResourceSpec property) shell_args (matflow.ElementResources attribute) (matflow.ResourceSpec property) shell_idx (matflow.Jobscript property)

SHELL_NAME matflow-submission-shell-info command line option shell_name (matflow.Jobscript property) show() (in module matflow) (matflow.param_classes.seeds.MicrostructureSeeds method) show_all_EAR_statuses() (matflow.Workflow method) show_legend() (in module matflow) show_tracebacks (matflow.CompactProblemFormatter property) single_label (matflow.SchemaInput property) single_labelled_data (matflow.SchemaInput property) single_labelled_type (matflow.SchemaInput property) SingleCrystalParameters (class in matflow.param_classes.single_crystal_parameters) skip (matflow.ElementActionRun property) skip_downstream_iterations() (matflow.WorkflowLoop method) skip_downstream_on_failure (matflow.ElementResources attribute) (matflow.ResourceSpec property) skip_reason (matflow.ElementActionRun property) SLURM_is_parallel (matflow.ElementResources property) SLURM_num_cpus_per_task (matflow.ElementResources attribute) (matflow.ResourceSpec property) SLURM_num_nodes (matflow.ElementResources attribute) (matflow.ResourceSpec property) SLURM_num_tasks (matflow.ElementResources attribute) (matflow.ResourceSpec property) SLURM_num_tasks_per_node (matflow.ElementResources attribute) (matflow.ResourceSpec property) SLURM_partition (matflow.ElementResources attribute) (matflow.ResourceSpec property) SlurmPosix (class in matflow) snapshot_end (matflow.ElementActionRun property) snapshot_start (matflow.ElementActionRun property) SOURCE matflow-data-install-cache command line option matflow-program-install-cache command line option source_file (matflow.Environment property) (matflow.WorkflowTemplate attribute) source_type (matflow.InputSource attribute) sourceable_elem_iters (matflow.ElementSet attribute) specifiers (matflow.Environment attribute) specs_fmt (matflow.Environment property) start (matflow.NumCores attribute) start_time (matflow.ElementActionRun property) (matflow.Jobscript property) (matflow.Submission property) start_zmq_server() (matflow.Executor method) state_lookup (matflow.SGEPosix attribute) (matflow.SlurmPosix attribute) status (matflow.ElementActionRun property) (matflow.Submission property) std_path (matflow.Jobscript property) stderr (matflow.Command attribute) stdin (matflow.Command attribute) stdout (matflow.Command attribute) stem (matflow.FileNameSpec property) (matflow.FileSpec property) step (matflow.NumCores attribute) steps (matflow.param_classes.load.LoadCase attribute) stop (matflow.NumCores attribute) stop_zmq_server() (matflow.Executor method) store_contents (matflow.InputFile property) (matflow.InputFileGeneratorSource property) (matflow.OutputFileParserSource property) store_format (matflow.Workflow property) store_kwargs (matflow.WorkflowTemplate attribute) strain (matflow.param_classes.load.LoadStep property) strain_like_tensor (matflow.param_classes.load.LoadStep property) strain_rate (matflow.param_classes.load.LoadStep property) StrainRateMode (class in matflow.param_classes.load) stress (matflow.param_classes.load.LoadStep attribute) SUB_IDX matflow-workflow-WORKFLOW_REF-sub command line option sub_parameters (matflow.Parameter attribute) Submission (class in matflow) submission (matflow.Jobscript property) (matflow.JobscriptBlock property) SUBMISSION_IDX matflow-internal-workflow-PATH-execute-combined-runs command line option matflow-internal-workflow-PATH-execute-run command line option submission_idx (matflow.ElementActionRun property) submission_parts (matflow.Submission property) submissions (matflow.Workflow property) submissions_path (matflow.Workflow property) submit() (matflow.Jobscript method) (matflow.Submission method) (matflow.Workflow method) submit_cmdline (matflow.Jobscript property) submit_hostname (matflow.Jobscript property) submit_machine (matflow.Jobscript property) submit_time (matflow.Jobscript property) submit_workflow() (in module matflow) submitted_jobscripts (matflow.Submission property) SubParameter (class in matflow) success (matflow.ElementActionRun property) Surrogate (class in matflow.param_classes.surrogate) symbol (matflow.param_classes.load.StrainRateMode attribute)

T

TAB (matflow.param_classes.moose.MooseBlock attribute) take_snapshot() (matflow.RunDirAppFiles class method) target_def_grad (matflow.param_classes.load.LoadStep attribute) target_def_grad_rate (matflow.param_classes.load.LoadStep attribute) target_vel_grad (matflow.param_classes.load.LoadStep attribute) Task (class in matflow) task (matflow.Element property) (matflow.ElementAction property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ElementParameter attribute) (matflow.ElementPropagation attribute) (matflow.Elements property) (matflow.ElementSet property) TASK (matflow.InputSourceType attribute) task (matflow.ParameterPath attribute) (matflow.Parameters attribute) (matflow.TaskInputParameters attribute) (matflow.TaskOutputParameters attribute) task() (matflow.InputSource class method) task_actions (matflow.JobscriptBlock property) task_artifacts_path (matflow.Workflow property) task_elements (matflow.JobscriptBlock property) task_indices (matflow.WorkflowLoop property) task_insert_IDs (matflow.JobscriptBlock property) (matflow.Loop property) (matflow.WorkflowLoop property) task_loop_idx (matflow.JobscriptBlock property) task_objects (matflow.Loop property) (matflow.WorkflowLoop property) task_ref (matflow.InputSource attribute) task_refs (matflow.Loop property) (matflow.WorkflowLoop property) task_schema (matflow.Action property) (matflow.SchemaInput property) task_source_type (matflow.InputSource attribute) task_template (matflow.ElementSet property) (matflow.MetaTaskSchema property) (matflow.TaskSchema property) TaskInputParameters (class in matflow) TaskList (class in matflow) TaskObjective (class in matflow) TaskOutputParameters (class in matflow) tasks (matflow.Workflow property) (matflow.WorkflowTemplate attribute) TaskSchema (class in matflow) TaskSchemasList (class in matflow) TaskSourceType (class in matflow) TaskTemplateList (class in matflow) template (matflow.Workflow property) (matflow.WorkflowLoop property) (matflow.WorkflowTask property) template_components (matflow.Workflow property) TEMPLATE_FILE_OR_STR matflow-go command line option matflow-make command line option temporary_rename() (matflow.Workflow class method) termination (matflow.Loop property) termination_task (matflow.Loop property) termination_task_insert_ID (matflow.Loop property) termination_task_ref (matflow.Loop property) test() (matflow.ActionRule method) (matflow.Rule method) test_encode_decode_arviz_inference_data() (in module matflow.tests.test_encoders_decoders) test_hpcflow_version() (in module matflow.tests.test_cli) test_masked_array_from_list_1D() (in module matflow.tests.test_utils) test_masked_array_from_list_1D_masked() (in module matflow.tests.test_utils) test_masked_array_from_list_2D() (in module matflow.tests.test_utils) test_masked_array_from_list_2D_masked() (in module matflow.tests.test_utils) test_rules() (matflow.Action method) test_termination() (matflow.WorkflowLoop method) test_version() (in module matflow.tests.test_cli) time_limit (matflow.ElementResources attribute) (matflow.ResourceSpec property) TMP_DIR_NAME (matflow.Submission attribute) tmp_path (matflow.Submission property) to_dict() (matflow.Action method) (matflow.ActionEnvironment method) (matflow.ActionRule method) (matflow.ActionScope method) (matflow.Command method) (matflow.CommandFilesList method) (matflow.ElementFilter method) (matflow.ElementGroup method) (matflow.ElementResources method) (matflow.ElementSet method) (matflow.Environment method) (matflow.EnvironmentsList method) (matflow.Executable method) (matflow.ExecutableInstance method) (matflow.ExecutablesList method) (matflow.FileNameExt method) (matflow.FileNameSpec method) (matflow.FileNameStem method) (matflow.FileSpec method) (matflow.GroupList method) (matflow.Import method) (matflow.ImportParameter method) (matflow.InputFile method) (matflow.InputFileGenerator method) (matflow.InputFileGeneratorSource method) (matflow.InputSource method) (matflow.InputValue method) (matflow.Jobscript method) (matflow.JobscriptBlock method) (matflow.Loop method) (matflow.MetaTask method) (matflow.MetaTaskSchema method) (matflow.MultiPathSequence method) (matflow.NumCores method) (matflow.OutputFileParser method) (matflow.OutputFileParserSource method) (matflow.OutputLabel method) (matflow.param_classes.load.LoadCase method) (matflow.param_classes.load.LoadStep method) (matflow.param_classes.moose.MooseInputDeck method) (matflow.param_classes.orientations.OrientationRepresentation method) (matflow.param_classes.orientations.Orientations method) (matflow.param_classes.orientations.UnitCellAlignment method) (matflow.param_classes.seeds.MicrostructureSeeds method) (matflow.param_classes.single_crystal_parameters.SingleCrystalParameters method) (matflow.param_classes.surrogate.Surrogate method) (matflow.Parameter method) (matflow.ParameterPath method) (matflow.ParametersList method) (matflow.ParameterValue method) (matflow.ResourceList method) (matflow.ResourceSpec method) (matflow.Rule method) (matflow.SchemaInput method) (matflow.SchemaOutput method) (matflow.SchemaParameter method) (matflow.Submission method) (matflow.Task method) (matflow.TaskList method) (matflow.TaskObjective method) (matflow.TaskSchema method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.ValuePerturbation method) (matflow.ValueSequence method) (matflow.WorkflowLoopList method) (matflow.WorkflowTaskList method) (matflow.WorkflowTemplate method)

to_element_set_data() (matflow.Element method) to_file() (matflow.param_classes.moose.MooseBlock method) (matflow.param_classes.moose.MooseInputDeck method) to_json_like() (matflow.Action method) (matflow.ActionEnvironment method) (matflow.ActionRule method) (matflow.ActionScope method) (matflow.Command method) (matflow.CommandFilesList method) (matflow.ElementFilter method) (matflow.ElementGroup method) (matflow.ElementResources method) (matflow.ElementSet method) (matflow.Environment method) (matflow.EnvironmentsList method) (matflow.Executable method) (matflow.ExecutableInstance method) (matflow.ExecutablesList method) (matflow.FileNameExt method) (matflow.FileNameSpec method) (matflow.FileNameStem method) (matflow.FileSpec method) (matflow.GroupList method) (matflow.Import method) (matflow.ImportParameter method) (matflow.InputFile method) (matflow.InputFileGenerator method) (matflow.InputFileGeneratorSource method) (matflow.InputSource method) (matflow.InputValue method) (matflow.Jobscript method) (matflow.JobscriptBlock method) (matflow.Loop method) (matflow.MetaTask method) (matflow.MetaTaskSchema method) (matflow.MultiPathSequence method) (matflow.NumCores method) (matflow.OutputFileParser method) (matflow.OutputFileParserSource method) (matflow.OutputLabel method) (matflow.Parameter method) (matflow.ParameterPath method) (matflow.ParametersList method) (matflow.ResourceList method) (matflow.ResourceSpec method) (matflow.Rule method) (matflow.SchemaInput method) (matflow.SchemaOutput method) (matflow.SchemaParameter method) (matflow.Submission method) (matflow.Task method) (matflow.TaskList method) (matflow.TaskObjective method) (matflow.TaskSchema method) (matflow.TaskSchemasList method) (matflow.TaskTemplateList method) (matflow.ValuePerturbation method) (matflow.ValueSequence method) (matflow.WorkflowLoopList method) (matflow.WorkflowTaskList method) (matflow.WorkflowTemplate method) to_persistent() (matflow.Task method) to_string() (matflow.ActionScope method) (matflow.InputSource method) (matflow.param_classes.moose.MooseInputDeck method) total_time (matflow.param_classes.load.LoadStep attribute) try_write_commands() (matflow.ElementActionRun method) ts_fmt (matflow.Workflow property) ts_name_fmt (matflow.Workflow property) typ (matflow.ActionScope attribute) (matflow.Parameter attribute) (matflow.SchemaInput property) (matflow.SchemaOutput property) (matflow.SchemaParameter property) type (matflow.param_classes.load.LoadCase property) (matflow.param_classes.load.LoadStep property) (matflow.param_classes.orientations.OrientationRepresentation attribute) types (matflow.param_classes.load.LoadCase property)

U

undefined_input_types (matflow.ElementSet property) (matflow.Task property) undefined_inputs (matflow.Task property) uniaxial() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) uniaxial_cyclic() (matflow.param_classes.load.LoadCase class method) (matflow.param_classes.load.LoadStep class method) unique_name (matflow.WorkflowTask property) unique_properties (matflow.DirectPosix property) (matflow.DirectWindows property) (matflow.QueuedScheduler property) (matflow.SGEPosix property) (matflow.SlurmPosix property) unit_cell_alignment (matflow.param_classes.orientations.Orientations attribute)

UnitCellAlignment (class in matflow.param_classes.orientations) universal_input_types (matflow.Task property) unload_config() (in module matflow.tests.conftest) unzip() (matflow.Workflow method) update() (matflow.param_classes.moose.MooseInputDeck method) (matflow.param_classes.single_crystal_parameters.Perturbation method) upstream_tasks (matflow.WorkflowLoop property) (matflow.WorkflowTask property) url (matflow.Workflow property) url_slug (matflow.Parameter property) use_EARs_cache (matflow.Submission property) use_job_array (matflow.ElementResources attribute) (matflow.ResourceSpec property) use_rich_tracebacks (matflow.CompactProblemFormatter property) using_EARs_cache() (matflow.Submission method)

V

validate_against_machine() (matflow.ElementResources method) VALUE matflow-config-append command line option matflow-config-prepend command line option matflow-config-set command line option matflow-config-update command line option matflow-internal-workflow-PATH-save-parameter command line option value (matflow.ElementParameter property) (matflow.InputValue property) (matflow.param_classes.load.StrainRateMode property) (matflow.param_classes.orientations.EulerDefinition property) (matflow.ValuePerturbation property) value() (matflow.FileNameExt method) (matflow.FileNameSpec method) (matflow.FileNameStem method) (matflow.FileSpec method)

value_class_method (matflow.InputValue attribute) (matflow.ValueSequence attribute) ValuePerturbation (class in matflow) values (matflow.MultiPathSequence property) (matflow.ValueSequence property) values() (matflow.param_classes.single_crystal_parameters.Perturbation method) ValueSequence (class in matflow) variables (matflow.Command attribute) VECTOR_SCALAR (matflow.param_classes.orientations.QuatOrder attribute) VEL_GRAD (matflow.param_classes.load.StrainRateMode attribute) VEL_GRAD_APPROX (matflow.param_classes.load.StrainRateMode attribute) version (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) version_info (matflow.Jobscript property)

W

wait() (matflow.Workflow method) wait_for_jobscripts() (matflow.DirectPosix class method) (matflow.DirectWindows class method) (matflow.QueuedScheduler method) (matflow.SGEPosix method) (matflow.SlurmPosix method) WARNING_COLOUR (matflow.CompactProblemFormatter attribute) web_doc (matflow.MetaTaskSchema attribute) (matflow.TaskSchema attribute) where (matflow.ElementGroup attribute) (matflow.ElementRepeats attribute) (matflow.InputSource attribute) (matflow.OutputLabel attribute) Workflow (class in matflow) workflow (matflow.Element property) (matflow.ElementActionRun property) (matflow.ElementIteration property) (matflow.ImportParameter property) (matflow.InputFile property) (matflow.InputFileGeneratorSource property) (matflow.InputValue property) (matflow.Jobscript property) (matflow.JobscriptBlock property) (matflow.OutputFileParserSource property) (matflow.ResourceSpec property) (matflow.Submission property) (matflow.ValuePerturbation property) (matflow.ValueSequence property) (matflow.WorkflowLoop property) (matflow.WorkflowTask property) (matflow.WorkflowTemplate attribute) workflow_app_alias (matflow.Jobscript property)

WORKFLOW_APP_ALIAS (matflow.Submission attribute) WORKFLOW_NAME matflow-demo-workflow-copy command line option matflow-demo-workflow-go command line option matflow-demo-workflow-make command line option matflow-demo-workflow-show command line option WORKFLOW_PATH matflow-unzip command line option WORKFLOW_REF matflow-cancel command line option matflow-open-workflow command line option matflow-rechunk command line option matflow-workflow command line option matflow-zip command line option workflow_template (matflow.Loop property) (matflow.ResourceList property) (matflow.ResourceSpec property) (matflow.Task attribute) (matflow.WorkflowBlueprint attribute) WorkflowBlueprint (class in matflow) WorkflowLoop (class in matflow) WorkflowLoopList (class in matflow) WorkflowTask (class in matflow) WorkflowTaskList (class in matflow) WorkflowTemplate (class in matflow) write_app_logs (matflow.ElementResources attribute) (matflow.ResourceSpec property) write_EAR_ID_file() (matflow.JobscriptBlock method) write_jinja_template() (matflow.ElementActionRun method) write_jobscript() (matflow.Jobscript method) write_program_data_in_files() (matflow.ElementActionRun method) write_script_data_in_files() (matflow.ElementActionRun method) write_script_indices_file() (matflow.Jobscript method)

X

x (matflow.param_classes.orientations.UnitCellAlignment attribute)

Y

y (matflow.param_classes.orientations.UnitCellAlignment attribute)

Z

z (matflow.param_classes.orientations.UnitCellAlignment attribute)

zip() (matflow.Workflow method) zmq_context (matflow.Executor property)